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KMID : 0545120110210060545
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Journal of Microbiology and Biotechnology
2011 Volume.21 No. 6 p.545 ~ p.555
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Diversity Analysis of Diazotrophic Bacteria Associated with the Roots of Tea (Camellia sinensis (L.) O. Kuntze)
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Arvind Gulati
Swati Sood
Praveen Rahi
Rishu Thakur
Sunita Chauhan
Isha Chawla nee Chadha
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Abstract
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The diversity elucidation by amplified ribosomal DNA restriction analysis and 16S rDNA sequencing of 96 associative diazotrophs, isolated from the feeder roots of tea on enriched nitrogen-free semisolid media, revealed the predominance of Gram-positive over Gram-negative bacteria within the Kangra valley in Himachal Pradesh, India. The Gram-positive bacteria observed belong to two taxonomic groupings; Firmicutes, including the genera Bacillus and Paenibacillus; and Actinobacteria, represented by the genus Microbacterium. The Gram-negative bacteria included α-Proteobacteria genera Brevundimonas, Rhizobium, and Mesorhizobium; γ-Proteobacteria genera Pseudomonas and Stenotrophomonas; and β-Proteobacteria genera Azospira, Burkholderia, Delftia, Herbaspirillum and Ralstonia. The low level of similarity of two isolates, with the type strains Paenibacillus xinjiangensis and Mesorhizobium albiziae, suggests the possibility of raising species novum. The bacterial strains of different phylogenetic groups exhibited distinct carbon-source utilization patterns and fatty acid methyl ester profiles. The strains differed in their nitrogenase activities with relatively high activity seen in the Gramnegative strains exhibiting the highest similarity to Azospira oryzae, Delftia lacustris and Herbaspirillum huttiense.
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KEYWORD
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Camellia sinensis, Diazotrophic bacteria, Acetylene reduction assay, 16S rDNA sequencing, FAME analysis, Carbon-source utilization
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